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statsmodels.stats.multitest.multipletests¶ statsmodels.stats.multitest. multipletests (pvals, alpha = 0.05, method = 'hs', is_sorted = False, returnsorted = False) [source] ¶ Test results and p-value correction for multiple tests

statsmodels/statsmodels/stats/multitest.py ... from statsmodels.stats. ... `fdr_tsbky` : two stage fdr correction (non-negative). is_sorted : bool.

statsmodels.stats.multitest.fdrcorrection ... This covers Benjamini/Hochberg for independent or positively correlated and Benjamini/Yekutieli for general or ...

python code examples for statsmodels.stats.multitest.fdrcorrection. Learn how to use python api statsmodels.stats.multitest.fdrcorrection.

Examples-----Basic use (the null Z-scores are taken to be standard normal): >>> from statsmodels.stats.multitest import local_fdr >>> import numpy as np >>> zscores = np.random.randn(30) >>> fdr = local_fdr(zscores) Use a Gaussian null distribution estimated from the data: >>> null = EmpiricalNull(zscores) >>> fdr = local_fdr(zscores, null_pdf ...

statsmodels.stats.multitest.fdrcorrection(pvals, alpha=0.05, method='indep', is_sorted=False)[source] ¶. pvalue correction for false discovery rate. This covers Benjamini/Hochberg for independent or positively correlated and Benjamini/Yekutieli for general or negatively correlated tests. Parameters.

statsmodels.stats.multitest.fdrcorrection¶ statsmodels.stats.multitest.fdrcorrection (pvals, alpha=0.05, method='indep', is_sorted=False) [source] ¶ pvalue correction for false discovery rate. This covers Benjamini/Hochberg for independent or positively correlated and Benjamini/Yekutieli for general or negatively correlated tests.

Python statsmodels.stats.multitest.fdrcorrection() Examples. The following are 4 code examples for showing how to use ...

statsmodels.stats.multitest.fdrcorrection¶ ... pvalue correction for false discovery rate. This covers Benjamini/Hochberg for independent or positively correlated ...

As examples, suppose we have 30 variables and we want to test for each of them whether ... import statsmodels.stats.multitest as smm rej, ...

Python. statsmodels.stats.multitest.fdrcorrection () Examples. The following are 4 code examples for showing how to use statsmodels.stats.multitest.fdrcorrection () . These examples are extracted from open source projects. You can vote up the ones you like or vote down the ones you don't like, and go to the original project or source file by ...

statsmodels.stats.multitest.multipletests¶ statsmodels.stats.multitest. multipletests (pvals, alpha = 0.05, method = 'hs', is_sorted = False, returnsorted = False) [source] ¶ Test results and p-value correction for multiple tests. Parameters pvals array_like, 1-d. uncorrected p-values.

Examples-----Basic use (the null Z-scores are taken to be standard normal): >>> from statsmodels.stats.multitest import local_fdr >>> import numpy as np >>> zscores = np.random.randn(30) >>> fdr = local_fdr(zscores) Use a Gaussian null distribution estimated from the data: >>> null = EmpiricalNull(zscores) >>> fdr = local_fdr(zscores, null_pdf ...

The following are 4 code examples for showing how to use statsmodels.stats.multitest.fdrcorrection().These examples are extracted from open source projects. You can vote up the ones you like or vote down the ones you don't like, and go to the original project or source file by following the links above each example.

The following are 7 code examples for showing how to use statsmodels.stats.multitest.multipletests().These examples are extracted from open source projects. You can vote up the ones you like or vote down the ones you don't like, and go to the original project or source file by following the links above each example.

Example: python fdr correction from statsmodels.stats.multitest import fdrcorrection rejected, q-value = fdrcorrection(my_list_of_p_values)

The following are 7 code examples for showing how to use statsmodels.stats.multitest.multipletests().These examples are extracted from open source projects. You can vote up the ones you like or vote down the ones you don't like, and go to the original project or source file by following the links above each example.

statsmodels.stats.multitest.fdrcorrection¶ statsmodels.stats.multitest.fdrcorrection (pvals, alpha=0.05, method='indep', is_sorted=False) [source] ¶ pvalue correction for false discovery rate. This covers Benjamini/Hochberg for independent or positively correlated and Benjamini/Yekutieli for general or negatively correlated tests.

In statsmodels 0.80, use import statsmodels.stats.multitest as multi; multi.multipletests(...) . – spinup. Apr 11 '18 at 6: ...

statsmodels.stats.multitest.local_fdr¶. statsmodels.stats.multitest.local_fdr. Calculate local FDR values for a list of Z-scores. The assumed proportion of true null hypotheses. The density of null Z-scores; if None, use standard normal. The maximum exponent in the polynomial expansion of the density of non-null Z-scores.

statsmodels.stats.multitest.fdrcorrection. statsmodels.stats.multitest.fdrcorrection(pvals, alpha=0.05, method='indep', is_sorted=False)[source] ¶. pvalue correction for false discovery rate. This covers Benjamini/Hochberg for independent or positively correlated and Benjamini/Yekutieli for general or negatively correlated tests.

Source code for statsmodels.stats.multitest ... `fdr_tsbh` : two stage fdr correction (non-negative) `fdr_tsbky` : two stage fdr correction (non-negative) ...

Python fdrcorrection - 9 examples found. ... numpy.invert(inA)]) t, pvals = stats.ttest_ind(A, B) rejected, qvals = multitest.fdrcorrection(pvals, ...