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tea genome

The Chromosome-Level Reference Genome of Tea Tree Unveils ...
www.cell.com › molecular-plant › fulltext
Apr 27, 2020 · This chromosome-level genome assembly of the tea tree is powerful in identifying all types of long LTR retrotransposons and characterizing the abundance of retrotransposon diversity, allowing to resolve the nature of the repetitive landscape of such a large genome.
Draft genome sequence of Camellia sinensis var. sinensis ...
pubmed.ncbi.nlm.nih.gov › 29678829
Tea, one of the world's most important beverage crops, provides numerous secondary metabolites that account for its rich taste and health benefits. Here we present a high-quality sequence of the genome of tea, Camellia sinensisvar. sinensis(CSS), using both Illumina and PacBio sequencing technologies.
TeaPGDB: Tea Plant Genome Database - Maximum ...
http://www.maxapress.com › pdf › BPR-2021-0005
With the development of the third-generation sequencing technology, several genome sequences of tea plants have been published. These genomic ...
The Reference Genome of Tea Plant and Resequencing of 81 ...
https://www.sciencedirect.com/science/article/pii/S1674205220301349
06.07.2020 · Tea plant is an important economic crop, which is used to produce the world's oldest and most widely consumed tea beverages. Here, we present a high-quality reference genome assembly of the tea plant (Camellia sinensis var. sinensis) consisting of 15 pseudo-chromosomes.LTR retrotransposons (LTR-RTs) account for 70.38% of the genome, and we …
Tea Plant Information Archive(TPIA): A comprehensive ...
tpdb.shengxin.ren
The genome paper of tea plant focusing on the evolution of tea plant genome and genetic basis of tea quality has been published in PNAS on April 24, 2018. 2018-8-11 Novelty - TPIA is the first integrated and interactive knowledge database of tea plant up to now.
The Tea Tree Genome Provides Insights into Tea Flavor and ...
https://www.sciencedirect.com/science/article/pii/S167420521730103X
05.06.2017 · Tea is the world's oldest and most popular caffeine-containing beverage with immense economic, medicinal, and cultural importance. Here, we present the first high-quality nucleotide sequence of the repeat-rich (80.9%), 3.02-Gb genome of the cultivated tea tree Camellia sinensis.We show that an extraordinarily large genome size of tea tree is resulted …
The tea plant reference genome and improved gene ... - NCBI
https://www.ncbi.nlm.nih.gov › pmc
The genome properties of tea plant were characterized by performing the k-mer analysis of sequencing data from short-insert libraries using ...
Tea plant genomics: achievements, challenges and ...
https://pubmed.ncbi.nlm.nih.gov/31908810
Tea is among the world's most widely consumed non-alcoholic beverages and possesses enormous economic, health, and cultural values. It is produced from the cured leaves of tea plants, which are important evergreen crops globally cultivated in over 50 countries. Along with recent innovations and adva …
Population sequencing enhances understanding of tea plant ...
https://www.nature.com/articles/s41467-020-18228-8
07.09.2020 · Tea is an economically important plant characterized by a large genome, high heterozygosity, and high species diversity. In this study, we assemble a 3.26-Gb high-quality chromosome-scale genome ...
Draft genome sequence of Camellia sinensis var ... - PNAS
https://www.pnas.org › content
A total of 15,224 candidate gene families were identified in the tea genome, of which 429 were tea-specific and 11,128 were shared among all 11 ...
Genome-wide identification of the tea plant bHLH ...
www.ncbi.nlm.nih.gov › pmc › articles
May 24, 2021 · Tea trichomes contain abundant metabolites, including theanine, catechins, volatiles and caffeine30,31. These metabolites have different flavors and tastes in tea infusions. Theanine makes the flavor of sweet and umami, and catechins and caffeine make the flavor of bitterness and astringency in tea infusions30.
Tea Plant Genome Database(TeaPGDB)
eplant.njau.edu.cn/tea/index.html
With the advent of the era of genomics, the genome sequencing work in the tea plant has been greatly promoted and produced a huge amount of data. So far, there are 6 species of genomes and seven sets of data, gene coding sequences, protein sequences, various annotation information, expression data and miRNA data in the Tea Plant Genome database and …
The Reference Genome of Tea Plant and ... - Science Direct
https://www.sciencedirect.com › pii
The current assembly of the tea plant genome comprises 15 pseudo-chromosomes with a contig N50 length of 600 kb, which is approximate 30-fold ...
Tea Genome| NTRF
http://ntrfindia.org › Tea-Genome
The high quality draft sequence of tea genome will facilitate the studies related to inheritance of agronomically important traits in tea, for monitoring the ...
The tea plant reference genome and improved gene ...
https://www.nature.com/articles/s41597-019-0127-1
15.07.2019 · Tea is a globally consumed non-alcohol beverage with great economic importance. However, lack of the reference genome has largely …
Haplotype-resolved genome assembly provides insights into ...
www.nature.com › articles › s41588/021/00895-y
Jul 15, 2021 · One of the studies of the tea genome generated a phased assembly based on construction of a genetic map. This strategy required a large effort to perform resequencing and variant calling of 135...
The Chromosome-Level Reference Genome of Tea Tree Unveils ...
https://www.cell.com/molecular-plant/fulltext/S1674-2052(20)30133-7
27.04.2020 · To further investigate the tea tree genome size evolution, we generated the high-quality chromosome-length reference genome of C.sinensis var. sinensis by using long-read single-molecule real-time (SMRT) (∼417.95 Gb, ∼127.66-fold coverage) and Hi-C (909 454 810 Hi-C reads) sequencing technologies (Supplemental Tables 1–3).We first employed the Illumina …
Draft genome sequence of Camellia sinensis var. sinensis ...
https://pubmed.ncbi.nlm.nih.gov/29678829
Tea, one of the world's most important beverage crops, provides numerous secondary metabolites that account for its rich taste and health benefits. Here we present a high-quality sequence of the genome of tea, Camellia sinensis var. sinensis (CSS), using both Illumina and PacBio sequen …
Haplotype-resolved genome assembly provides insights into ...
https://www.nature.com/articles/s41588-021-00895-y
15.07.2021 · Haplotype-resolved genome assembly of an Oolong tea cultivar Tieguanyin and population genomic analyses of 190 Camellia accessions provide insights into the evolutionary history of the tea plant ...
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http://tpdb.shengxin.ren
The current release of TPIA employs the first comprehensively annotated tea plant genome (Camellia sinensis) as framework, and incorporates with abundant ...
The Reference Genome of Tea Plant and ... - Cell Press
https://www.cell.com › molecular-plant › pdf
Exploring the genomic vari- ants based on a high-quality genome assembly and resequenced genomes of diverse tea plants will thus help to make ...
Tea Genome| NTRF
ntrfindia.org › Tea-Genome
Indian Tea Genome Sequences Mission Tea [Camellia sinensis (L.) O. Kuntze] is one of the oldest, most widely consumed, and least expensive natural beverages, known world over for its heritage brew, with various flavors and antioxidant properties. Tea is an important plantation crop of India and earns huge foreign exchange by export.
The Tea Tree Genome Provides Insights into Tea Flavor and ...
www.sciencedirect.com › science › article
Jun 05, 2017 · Tea is the world's oldest and most popular caffeine-containing beverage with immense economic, medicinal, and cultural importance. Here, we present the first high-quality nucleotide sequence of the repeat-rich (80.9%), 3.02-Gb genome of the cultivated tea tree Camellia sinensis.
Haplotype-resolved genome assembly provides insights ...
https://www.nature.com › articles
One of the studies of the tea genome generated a phased assembly based on construction of a genetic map. This strategy required a large ...
Tea: Genome and Genetics | SpringerLink
https://link.springer.com › book
A monograph on breeding and biotechnology of tea plantation. The book is an all-inclusive compilation discussing tea crops around its morphological ...